sysPipe
  • About
    Our Team Publications Acknowledgement Contact
  • systemPipeR
    systemPipeR Package Introduction Getting Started How to run a Workflow Workflow steps overview Workflow Templates CWL syntax SPR and CWL SPR detailed installation Reference Manual systemPipeRTools Data Visualization systemPipeRdata Vignette Rules Links SPR Bioconductor SPR GitHub SPRdata Bioconductor SPRdata GitHub SPT GitHub
  • Shiny
    SPS Documentation Github Bioconductor
  • Workflows
    Collection How to install Workflow
  • Outreach
    Conferences Presentations Videos Tutorials
  • News
    Bioconductor 3.13 Bioconductor 3.12
  • Documentation
    • systemPipeR
      • Introduction
      • Getting Started
      • Design and run Workflows
        • Build workflow interactively
        • Import workflow from template
        • Run/manage workflows
        • Visualize workflows
        • Explore workflow instances
        • Generate Reports
        • Export workflows
      • Workflow step examples
      • Workflow Templates
      • CWL
        • CWL syntax
        • SPR and CWL
        • createParam V1
        • createParam V2
      • SPR detailed installation instructions
      • Help Manual
      • systemPipe containers
      • Use Conda Environment
      • Workflow Plot Editor
      • Workflow steps overview
    • systemPipeTools
      • Data Visualizations
    • systemPipeRdata
      • Workflow templates and sample data
      • Rules to create a new Workflow Template
    • SPR Docker container
  1. Documentation
  2. systemPipeR

systemPipeR

This is the the table of content for systemPipeR package.

Sections


Introduction

Getting Started

Design and run Workflows

Workflow step examples

Workflow Templates

CWL

SPR detailed installation instructions

Help Manual

systemPipe containers

Use Conda Environment

Workflow Plot Editor

Workflow steps overview

Last modified 2022-06-05 : cwl v2 (81370e97)
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